Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph 03-map-se-blacklist-removal.cwl

ATAC-seq 03 mapping - reads: SE - blacklist removal

 https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/03-map-se-blacklist-removal.cwl

Branch/Commit ID: dd2241dbbbc23abd91b5e6a18c139530e7ef8d2b
workflow graph packed_no_main.cwl#collision

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/packed_no_main.cwl

Branch/Commit ID: 74a08ca0e90a223f98fdec73c88f36d783a4dde0

Packed ID: collision
workflow graph WGS QC workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: qc/workflow_wgs.cwl

Branch/Commit ID: 202b43b7449485a317c857d62ca7d39196764e65
workflow graph Bisulfite QC tools

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bisulfite_qc.cwl

Branch/Commit ID: 70e05adeda8b3b4c77b8947266684ce4305db6ac
workflow graph call-deconv-and-cor.cwl

https://github.com/PNNL-CompBio/decomprolute.git

Path: metrics/mrna-prot/call-deconv-and-cor.cwl

Branch/Commit ID: 102f6c7259c126e58d733aac476386afe0f20b73
workflow graph myfilter_vepannotation.cwl

https://github.com/teoloup/cwltools.git

Path: myfilter_vepannotation.cwl

Branch/Commit ID: ffff3e8d2310ff23766ce91ab04c7515518303b5
workflow graph Unaligned BAM to BQSR and VCF

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl

Branch/Commit ID: 39ac49f5d080bbb6bfa97246f46a5b621254f622
workflow graph chipseq-se.cwl

Runs ChIP-Seq BioWardrobe basic analysis with single-end data file.

https://github.com/Barski-lab/workflows.git

Path: workflows/chipseq-se.cwl

Branch/Commit ID: de847468843203ce92b6d19323c5fe77dc488e34
workflow graph scatter-valuefrom-wf4.cwl#main

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/scatter-valuefrom-wf4.cwl

Branch/Commit ID: 31ec48a8d81ef7c1b2c5e9c0a19e7623efe4a1e2

Packed ID: main
workflow graph module-1

https://github.com/mskcc/roslin-variant.git

Path: setup/cwl/module-1.cwl

Branch/Commit ID: 49d7810b6446d6aadfcdbb6b5deee9f02ad749c2