Explore Workflows

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Graph Name Retrieved From View
workflow graph trim-rnaseq-se-dutp.cwl

Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file.

https://github.com/Barski-lab/workflows.git

Path: workflows/trim-rnaseq-se-dutp.cwl

Branch/Commit ID: 144eee15187c1a1145ce1ee0239da69059fd2752
workflow graph bacterial_kmer

https://github.com/ncbi/pgap.git

Path: bacterial_kmer/wf_bacterial_kmer.cwl

Branch/Commit ID: 4e7b8f243f5356653edd286eab24f419f39da189
workflow graph mutect panel-of-normals workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/panel_of_normals.cwl

Branch/Commit ID: f401b02285f30de1c12ac2859134099fe04be33f
workflow graph sum-wf-noET.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/sum-wf-noET.cwl

Branch/Commit ID: 4fa45edd0c445c1cff7dee986d69a31cdd5e5dff
workflow graph cond-wf-009.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/conditionals/cond-wf-009.cwl

Branch/Commit ID: 4fa45edd0c445c1cff7dee986d69a31cdd5e5dff
workflow graph bacterial_orthology

https://github.com/ncbi/pgap.git

Path: bacterial_orthology/wf_bacterial_orthology.cwl

Branch/Commit ID: 4e7b8f243f5356653edd286eab24f419f39da189
workflow graph lhcbreconstruct.cwl

https://github.com/aldbr/dirac-cwl-proto.git

Path: test/workflows/lhcb/lhcbreconstruct.cwl

Branch/Commit ID: eca277c6a2fbb5929a0f642e03d67b9ff31ee8af
workflow graph diamond proteinworkflow

\"This workflow performs diamond protein alignment process for predicted protein sequences. It executes 2 processes: diamond index creation and diamond alignment. related CWL file: ./Tools/09_diamond_index.cwl ./Tools/11_diamond_uniprot_alignment.cwl ./Tools/11_diamond_uniprot_filter1.cwl ./Tools/11_diamond_uniprot_filter2.cwl\"

https://github.com/RyoMameda/workflow_cwl.git

Path: Workflow/diamond_protein_ssw.cwl

Branch/Commit ID: 1838569c1d6d3c15f58c254667d4c6258e67e5a6
workflow graph Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_orf_hmms.cwl

Branch/Commit ID: 4e7b8f243f5356653edd286eab24f419f39da189
workflow graph gatk-4.0.0.0-haplotypecaller-genotypegvcfs-libraries.cwl

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/gatk-4.0.0.0-haplotypecaller-genotypegvcfs-libraries.cwl

Branch/Commit ID: 4a92da8c82787588863e223c431d921801049f91