Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Filter single sample sv vcf from paired read callers(Manta/Smoove)

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/sv_paired_read_caller_filter.cwl

Branch/Commit ID: downsample_and_recall
workflow graph rna amplicon analysis for fastq files

RNAs - qc, preprocess, annotation, index, abundance

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/amplicon-fastq.workflow.cwl

Branch/Commit ID: master
workflow graph qiime2 create phylogenetic tree

Generate a tree for phylogenetic diversity analyses from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/bespin-workflows/16s-qiime2.git

Path: subworkflows/qiime2-05-phylogeny.cwl

Branch/Commit ID: develop
workflow graph downsample unaligned BAM and align

https://github.com/tmooney/cancer-genomics-workflow.git

Path: definitions/subworkflows/downsampled_alignment.cwl

Branch/Commit ID: downsample_and_recall
workflow graph Data2Services CWL workflow to convert CSV/TSV files with statements split, Vincent Emonet <vincent.emonet@gmail.com>

https://github.com/MaastrichtU-IDS/bio2rdf.git

Path: support/aynec-fb13-a/virtuoso-workflow/workflow.cwl

Branch/Commit ID: master
workflow graph Vegetation index

Vegetation index processor, the greatest

 https://github.com/EOEPCA/app-vegetation-index.git

Path: vegetation-index.cwl

Branch/Commit ID: master

Packed ID: vegetation-index
workflow graph wf_extract_prism_data.cwl

https://github.com/idaks/cwl_modeling.git

Path: yw_cwl_modeling/yw2cwl_parser/example_sql/extract_prism_data/wf_extract_prism_data.cwl

Branch/Commit ID: master
workflow graph test-workflow.cwl

https://github.com/hacchy1983/CWL-workflows.git

Path: Workflows/test-workflow.cwl

Branch/Commit ID: master
workflow graph tRNA_selection.cwl

https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: tools/tRNA_selection.cwl

Branch/Commit ID: 135976d
workflow graph RNASelector as a CWL workflow

https://doi.org/10.1007/s12275-011-1213-z

 https://github.com/EBI-Metagenomics/ebi-metagenomics-cwl.git

Path: workflows/rna-selector.cwl

Branch/Commit ID: master