Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph hybrid_error_correction.cwl

Sub workflow used in the Animal Genome Assembly pipeline by Kazuharu Arakawa (@gaou_ak), CWLized by Tazro Ohta (@inutano)

 https://github.com/pitagora-network/DAT2-cwl.git

Path: workflow/animal-genome-assembly/hybrid_error_correction.cwl

Branch/Commit ID: main
workflow graph pindel parallel workflow

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/subworkflows/pindel.cwl

Branch/Commit ID: low-vaf
workflow graph WGS QC workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_wgs.cwl

Branch/Commit ID: master
workflow graph extract_single_optional_file.cwl

https://github.com/NCI-GDC/aliquot-maf-cwl.git

Path: vcf-to-aliquot-maf/subworkflows/extract_single_optional_file.cwl

Branch/Commit ID: main
workflow graph manta.cwl

https://github.com/andurill/ACCESS-Pipeline.git

Path: workflows/subworkflows/manta.cwl

Branch/Commit ID: master
workflow graph qc.cwl

https://github.com/kinow/pipeline-v5.git

Path: workflows/conditionals/qc.cwl

Branch/Commit ID: eosc-life-gos
workflow graph helloworld-nested.cwl

https://github.com/audrium/reana-demo-scattered-helloworld.git

Path: workflow/cwl/helloworld-nested.cwl

Branch/Commit ID: master
workflow graph sc_atac_seq_process_and_analyze.cwl

https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git

Path: steps/sc_atac_seq_process_and_analyze.cwl

Branch/Commit ID: v2.0b8
workflow graph CNV_pipeline

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/workflow.cwl

Branch/Commit ID: 1.0.9
workflow graph 03-map-pe-umis.cwl

STARR-seq 03 mapping - reads: PE

 https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/STARR-seq_pipeline/03-map-pe-umis.cwl

Branch/Commit ID: master