Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl Branch/Commit ID: d40ef1462a4c210be3184609dbb3467ff61fc017 |
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spurious_annot
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https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: a1f39f21670be28427ceb91ceaeb9339545c18fc |
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workflow.cwl
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https://github.com/reanahub/reana-demo-root6-roofit.git
Path: workflow/cwl/workflow.cwl Branch/Commit ID: 7bcc95b2c8a901d831fda01308f74d2228ed945e |
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js-expr-req-wf.cwl#wf
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/js-expr-req-wf.cwl Branch/Commit ID: 513bf79c9e3ba98306006a87165de18bac7c04ee Packed ID: wf |
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fillout_workflow.cwl
Workflow to run GetBaseCountsMultiSample fillout on a number of bam files with a single maf file |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/fillout_workflow.cwl Branch/Commit ID: dbff0c5ae06a8b21ec70bc8279f32bce151cbfc2 |
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gatk-4.0.0.0-genomics-db-and-genotypegvcfs-per-interval.cwl
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https://github.com/wtsi-hgi/arvados-pipelines.git
Path: cwl/workflows/gatk-4.0.0.0-genomics-db-and-genotypegvcfs-per-interval.cwl Branch/Commit ID: b7aa668822c782191d0fe5641467885c023cc256 |
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trim-chipseq-pe.cwl
Runs ChIP-Seq BioWardrobe basic analysis with paired-end input data files. |
https://github.com/Barski-lab/workflows.git
Path: workflows/trim-chipseq-pe.cwl Branch/Commit ID: 144eee15187c1a1145ce1ee0239da69059fd2752 |
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step-valuefrom2-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/step-valuefrom2-wf.cwl Branch/Commit ID: 4bf61c8a3d519eefd8b9271af73974bec62535ba |
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rnaseq-alignment-quantification
This workflow retrieve SRA fastqc data and execute QC, alignment and quantification from TPMCalculator |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/RNA-Seq/rnaseq-alignment-quantification.cwl Branch/Commit ID: b5a440939ac6022ee81aeeb0dd7daf3983228a61 |
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tmb_workflow.cwl
Workflow to run the TMB analysis on a batch of samples and merge the results back into a single data clinical file |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/tmb_workflow.cwl Branch/Commit ID: dbff0c5ae06a8b21ec70bc8279f32bce151cbfc2 |
