Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph count-lines13-wf.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines13-wf.cwl

Branch/Commit ID: master
workflow graph cram_to_bam workflow

https://github.com/genome/cancer-genomics-workflow.git

Path: cram_to_bam/workflow.cwl

Branch/Commit ID: toil_compatibility
workflow graph texture_emblem.cwl

https://github.com/mr-c/stellaris-emblem-lab.git

Path: textures/texture_emblem.cwl

Branch/Commit ID: cwl
workflow graph bact_get_kmer_reference

https://github.com/ncbi/pgap.git

Path: task_types/tt_bact_get_kmer_reference.cwl

Branch/Commit ID: master
workflow graph minibam_sub_wf.cwl

This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!

https://github.com/david4096/oxog-dockstore-tools.git

Path: minibam_sub_wf.cwl

Branch/Commit ID: develop
workflow graph qsm_pipeline_v1.cwl

https://github.com/MGuevaraO/qsm_pipeline.git

Path: qsm_pipeline_v1.cwl

Branch/Commit ID: main
workflow graph validate_interleaved_fq.cwl

https://github.com/cancerit/workflow-seq-import.git

Path: cwls/validate_interleaved_fq.cwl

Branch/Commit ID: 0.3.0
workflow graph MACE ChIP-exo peak caller workflow for single-end samples

This workflow execute peak caller and QC from ChIP-exo for single-end samples using MACE

 https://gitlab.com/r78v10a07/cwl-workflow.git

Path: workflows/ChIP-exo/peak-caller-MACE-SE.cwl

Branch/Commit ID: master
workflow graph steplevel-resreq.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/steplevel-resreq.cwl

Branch/Commit ID: master
workflow graph Gathered Downsample and HaplotypeCaller

https://github.com/apaul7/cancer-genomics-workflow.git

Path: definitions/pipelines/gathered_downsample_and_recall.cwl

Branch/Commit ID: low-vaf