Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph PGAP Pipeline, simple user input, PGAPX-134

PGAP pipeline for external usage, powered via containers, simple user input: (FASTA + yaml only, no template)

https://github.com/ncbi/pgap.git

Path: pgap.cwl

Branch/Commit ID: 4533a5e930305c674057bc4cf5dda4f39d39b5df
workflow graph ani_top_n

https://github.com/ncbi/pgap.git

Path: task_types/tt_ani_top_n.cwl

Branch/Commit ID: 9bf0dc70af47b5c37fe6cbf3442cd52ff8f8025d
workflow graph three_step_color.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/three_step_color.cwl

Branch/Commit ID: 74a08ca0e90a223f98fdec73c88f36d783a4dde0
workflow graph scatter-valuefrom-wf5.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf5.cwl

Branch/Commit ID: 26870e38cec81af880cd3e4789ae6cee8fc27020
workflow graph scatterfail.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatterfail.cwl

Branch/Commit ID: 665141f319e6b23bd9924b14844f2e979f141944
workflow graph apolloServer-createOrganism-workflow.cwl

https://github.com/nal-i5k/organism_onboarding.git

Path: apolloServer-createOrganism-workflow.cwl

Branch/Commit ID: 7198756b4b1519d102178042924671bd677e9b17
workflow graph align_merge_sas

https://github.com/ncbi/pgap.git

Path: task_types/tt_align_merge_sas.cwl

Branch/Commit ID: a7d07dbc79182cc9814fbd7af8f100063fce3f63
workflow graph Subworkflow to allow calling cnvkit with cram instead of bam files

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_cnvkit.cwl

Branch/Commit ID: 6bfb64375e7ebb6eb40f463ede86d8deccdb9eff
workflow graph revsort_datetime.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/revsort_datetime.cwl

Branch/Commit ID: f1661438c07671b4738b1cad88c58b80541a76af
workflow graph wgs alignment and germline variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/germline_wgs_gvcf.cwl

Branch/Commit ID: b465f0da2806ddb6df481409541d13288ccb40ec