Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Bacterial Annotation, pass 1, genemark training, by HMMs (first pass)
|
https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_orf_hmms.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295 |
|
|
|
Execute CRISPR
|
https://github.com/ncbi/pgap.git
Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295 |
|
|
|
Non-Coding Bacterial Genes
|
https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_bacterial_noncoding.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295 |
|
|
|
Run tRNAScan
|
https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295 |
|
|
|
checkm
|
https://github.com/ncbi/pgap.git
Path: checkm/wf_checkm.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295 |
|
|
|
Create Genomic Collection for Bacterial Pipeline, ASN.1 input
|
https://github.com/ncbi/pgap.git
Path: genomic_source/wf_genomic_source_asn.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295 |
|
|
|
Align reference proteins plane complete workflow, with miniprot
|
https://github.com/ncbi/pgap.git
Path: protein_alignment/wf_protein_alignment_miniprot.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295 |
|
|
|
spurious_annot
|
https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass1.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295 |
|
|
|
spurious_annot pass2
|
https://github.com/ncbi/pgap.git
Path: spurious_annot/wf_spurious_annot_pass2.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295 |
|
|
|
Get Proteins
|
https://github.com/ncbi/pgap.git
Path: wf_bacterial_prot_src.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295 |
