Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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PGAP Pipeline
PGAP pipeline for external usage, powered via containers |
https://github.com/ncbi/pgap.git
Path: wf_common.cwl Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36 |
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811-12.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/811-12.cwl Branch/Commit ID: 67df61c8b3ea11f00d5f24c016e540b5c146d759 |
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scatterfail.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/scatterfail.cwl Branch/Commit ID: 6e9f82a6d2195d4f16f28fd6e1485138372fb430 |
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exome alignment and tumor-only variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/exome.cwl Branch/Commit ID: db0a91eb094d0a7c58042d4264986ea042dd4827 |
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tt_fscr_calls_pass1
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https://github.com/ncbi/pgap.git
Path: task_types/tt_fscr_calls_pass1.cwl Branch/Commit ID: 7edbf07405191db65a913e311a7f2260b076d36c |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 026bba9511561246ad65458f0f55c88cead26fbd |
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harmonization_bwa_mem.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/harmonization/harmonization_bwa_mem.cwl Branch/Commit ID: 286bce04c474d28bddeb7dbe43ab8d59919fe855 |
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sc_atac_seq_prep_process_analyze.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: sc_atac_seq_prep_process_analyze.cwl Branch/Commit ID: 3a271672e5bb47bf17ba61f27275b2605941a17f |
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cond-wf-005.1.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/cond-wf-005.1.cwl Branch/Commit ID: c46a3ad4e488e75b7a58032c129f0605f5e84f40 |
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blast.cwl
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https://github.com/common-workflow-lab/wdl-cwl-translator.git
Path: wdl2cwl/tests/cwl_files/blast.cwl Branch/Commit ID: 471bf44b717b69b108fc6d13bc71fac55827d1dd |
