Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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downsample unaligned BAM and align
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/downsampled_alignment.cwl Branch/Commit ID: c61af827113ebc41596aa839c65d21b4d2b0c8b6 |
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post-correct-test-files.cwl
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https://github.com/kbnlresearch/ochre.git
Path: ochre/cwl/post-correct-test-files.cwl Branch/Commit ID: 3668d0488e98b153986ed6dc002558eaed62427d |
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cond-wf-006.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/conditionals/cond-wf-006.cwl Branch/Commit ID: b60a42e3cc417c5b75b88fd7c6681abcc7ff5b89 |
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revsort.cwl
Reverse the lines in a document, then sort those lines. |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/revsort.cwl Branch/Commit ID: 135a0c67afd67383c44e89fba136ccd9ce6afb1f |
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Run genomic CMsearch (Rfam rRNA)
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https://github.com/ncbi/pgap.git
Path: bacterial_ncrna/wf_gcmsearch.cwl Branch/Commit ID: 4def84df33963fc9ac9d5c5f804b911d01a0d9ad |
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bacterial_kmer
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https://github.com/ncbi/pgap.git
Path: bacterial_kmer/wf_bacterial_kmer.cwl Branch/Commit ID: 4533a5e930305c674057bc4cf5dda4f39d39b5df |
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Execute CRISPR
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https://github.com/ncbi/pgap.git
Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 4def84df33963fc9ac9d5c5f804b911d01a0d9ad |
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Run tRNAScan
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 4def84df33963fc9ac9d5c5f804b911d01a0d9ad |
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Hello World
Outputs a message using echo |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/hello-workflow.cwl Branch/Commit ID: 9515acb2db507b639c8b9cc47ce97c5877005a82 |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 3c7a6e39d956ca065751f23ee0316ac3f3306d9a |
