Explore Workflows
View already parsed workflows here or click here to add your own
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LHCb MC workflow
This workflow is composed of 2 main steps that should generate 2 types of jobs: * MCSimulation (CommandLineTool): Gauss execution * MCReconstruction (Workflow): Boole, Moore, Brunel and DaVinci executions based on Gauss outputs |
Path: test/workflows/lhcb/description.cwl Branch/Commit ID: 7405ffaedca270d96a43b30d2bf22acdc42c3317 |
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concatenate-flag.cwl
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Path: workflows/concatenate-flag.cwl Branch/Commit ID: e31c2e97efa10efd023c65a68f4209e674731a0d |
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align_and_count.cwl
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Path: wdl2cwl/tests/cwl_files/align_and_count.cwl Branch/Commit ID: c45df54e2af61a38775959b02ee710e2674ce18f |
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md5sum.cwl
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Path: testdata/md5sum.cwl Branch/Commit ID: fa7b09bd27a2c45236c94d916c3d26e90a5a7baf |
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gcaccess_from_list
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Path: task_types/tt_gcaccess_from_list.cwl Branch/Commit ID: e2832ecc1c5f64a9e522bb1b24cd45f8bb2ca429 |
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kmer_cache_retrieve
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Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36 |
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count-lines8-wf.cwl
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Path: cwltool/schemas/v1.0/v1.0/count-lines8-wf.cwl Branch/Commit ID: 17268d1493d9e558113b2c35c0be6b3fb961b2a3 |
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Seed Protein Alignments
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Path: protein_alignment/wf_seed_seqids.cwl Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36 |
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exome alignment and somatic variant detection
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Path: definitions/pipelines/somatic_exome.cwl Branch/Commit ID: dc2c019c1aa24cc01b451a0f048cf94a35f163c4 |
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umi per-lane alignment subworkflow
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Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: 60d8a9e6c5f571ec9b37f10290a1f4613013f3e1 |
