Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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RNA-Seq alignment and transcript/gene abundance workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/rnaseq.cwl Branch/Commit ID: efbbe5ed51f6ac583e87a348785c72818a33f56e |
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exome alignment and somatic variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome.cwl Branch/Commit ID: efbbe5ed51f6ac583e87a348785c72818a33f56e |
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search.cwl#main
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/search.cwl Branch/Commit ID: 17268d1493d9e558113b2c35c0be6b3fb961b2a3 Packed ID: main |
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optional_src_mandatory_sink.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/optional_src_mandatory_sink.cwl Branch/Commit ID: f6aeeae01ca1d821f2be1966f48f5257100f90e5 |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: db0a91eb094d0a7c58042d4264986ea042dd4827 |
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04-peakcall-se.cwl
ATAC-seq 04 quantification - SE |
https://github.com/Duke-GCB/GGR-cwl.git
Path: v1.0/ATAC-seq_pipeline/04-peakcall-se.cwl Branch/Commit ID: c50b80e9b0eaaf4613f9feca44b3463bbfd288d5 |
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trnascan_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: 008a090fb1938fbb393494ac8fcb219f0d9f5295 |
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cram_to_bam workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 37a3622d1d03812e4f868b5024c52607696bfb75 |
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Detect DoCM variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: 37a3622d1d03812e4f868b5024c52607696bfb75 |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_germline.cwl Branch/Commit ID: 37a3622d1d03812e4f868b5024c52607696bfb75 |
