Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Chipseq alignment with qc and creating homer tag directory
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/chipseq_alignment.cwl Branch/Commit ID: 4ae14dd3a447c90022e3dfeb53fc05b8436e2775 |
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heatmap-prepare.cwl
Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order. |
https://github.com/Barski-lab/workflows.git
Path: tools/heatmap-prepare.cwl Branch/Commit ID: 4723ce567089dc9ee51e067b813c5b527a3da16a |
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scatter-wf4.cwl#main
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/scatter-wf4.cwl Branch/Commit ID: 048eb55aefd8d71d161fbc89ec0e888b8bfa0aa1 Packed ID: main |
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secret_wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/secret_wf.cwl Branch/Commit ID: 3bed7bbacf625d2dc95894efba43e45294e427a3 |
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rnaseq-se-dutp.cwl
Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file. |
https://github.com/Barski-lab/workflows.git
Path: workflows/rnaseq-se-dutp.cwl Branch/Commit ID: 4723ce567089dc9ee51e067b813c5b527a3da16a |
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CreateSymlink-workflow.cwl
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https://github.com/NAL-i5K/Organism_Onboarding.git
Path: CreateSymlink-workflow.cwl Branch/Commit ID: 45bb8fc5cc5e5fee3f29099469621a53d084757d |
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scatter-valuefrom-wf1.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-valuefrom-wf1.cwl Branch/Commit ID: b3639a4c5075abc562b7f9b816be0d4f7d711703 |
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create_snap_and_analyze.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: create_snap_and_analyze.cwl Branch/Commit ID: 302f1f3c019b74b85a4decc56c0793726e99c191 |
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wffail.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/wffail.cwl Branch/Commit ID: 3bed7bbacf625d2dc95894efba43e45294e427a3 |
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record-output-wf_v1_2.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/record-output-wf_v1_2.cwl Branch/Commit ID: 141048ae4b78aa765782bb752be4a1550edc2eea |
