Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph process VCF workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/strelka_process_vcf.cwl

Branch/Commit ID: f90b39e1b05e9bb37079b09f337f7e7ba5027f99
workflow graph downsample unaligned BAM and align

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/downsampled_alignment.cwl

Branch/Commit ID: 10870aefd20469e728969269ff3c54b3b8339a18
workflow graph spia_from_pileup.cwl

Runs SPIA to calculate the genotype distance between normal and tumor samples starting from the pilueps of the SNPs.

 https://github.com/demichelislab/SPICE-pipeline-CWL.git

Path: cwl/workflows/spia_from_pileup.cwl

Branch/Commit ID: 06e4a6f868651c8e26a88db518af1974159ecba9
workflow graph scatterfail.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatterfail.cwl

Branch/Commit ID: 74a08ca0e90a223f98fdec73c88f36d783a4dde0
workflow graph adapter for sequence_align_and_tag

Some workflow engines won't stage files in our nested structure, so parse it out here

 https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl

Branch/Commit ID: f7ac3eff79128831c9f7a565d5b187882f39aa58
workflow graph scatter-wf1.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/scatter-wf1.cwl

Branch/Commit ID: 2b295864bc81b59b0698af8076474465afcf48d8
workflow graph step-valuefrom4-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/step-valuefrom4-wf.cwl

Branch/Commit ID: 31bda22357987171f02ae6513fcc26e011e6afed
workflow graph scatter-wf1_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/scatter-wf1_v1_2.cwl

Branch/Commit ID: 70fbcd9776071edc2fd884308b016a4901b97554
workflow graph conditional_step_no_inputs.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/conditional_step_no_inputs.cwl

Branch/Commit ID: 6a10aa5ff43cd10c6895a98d8cef97472c823a3a
workflow graph scatter-valuefrom-wf1.cwl

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/scatter-valuefrom-wf1.cwl

Branch/Commit ID: 8dbb46740ea700469b609ae9a05f13e95cb5af6a