Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Transcripts annotation workflow
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https://github.com/mscheremetjew/workflow-is-cwl.git
Path: workflows/TranscriptsAnnotation-wf.cwl Branch/Commit ID: 264176e422f93fe61ba3a08874a50266e7b48df8 |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr_no_dup_marking.cwl Branch/Commit ID: 2979b565f88ceebca934611adbf3fb8cefd65a19 |
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gathered exome alignment and somatic variant detection for cle purpose
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_cle_gathered.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139 |
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count-lines13-wf.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/count-lines13-wf.cwl Branch/Commit ID: 19f2cb6e21db8624155c7e253b89c57df536fcc1 |
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default-wf5.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/default-wf5.cwl Branch/Commit ID: 955616b6c7692465bd85f6eb3e0e1cd2672124f4 |
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gdc_dnaseq_ar_workflow.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: subworkflows/main/gdc_dnaseq_ar_workflow.cwl Branch/Commit ID: 86f949778822efa7d95a1b2580bf4c7b5809a0bd |
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trnascan_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: 192b813eed8c0d368e69057cb39415175dd15128 |
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ChIP-seq peak caller workflow MACS2 based
This workflow execute peak caller and QC for ChIP-seq using MACS2 |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/ChIP-Seq/peak-calling-MACS2-PE-genome-size.cwl Branch/Commit ID: 590ed6c9803ba670411c48650bc24deef7863925 |
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mut3.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mut3.cwl Branch/Commit ID: cf9d7cdefa6dfb3b678636da02bc55b6108c04ac |
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md5sum.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/md5sum.cwl Branch/Commit ID: 18a3e768e1eda9bdc63d73ff8336a342e04e7a63 |
