Explore Workflows
View already parsed workflows here or click here to add your own
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EPOS-IT Array Curl WF
Downloads data based on an array of strings representing rest urls and a curl download workflow. |
Path: epos_accept_url_array_scatter.cwl Branch/Commit ID: master |
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prefactor.cwl
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Path: prefactor.cwl Branch/Commit ID: master |
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preprocess_vcf.cwl
This workflow will perform preprocessing steps on VCFs for the OxoG/Variantbam/Annotation workflow. |
Path: preprocess_vcf.cwl Branch/Commit ID: master |
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exomeseq-gatk4-03-organizedirectories.cwl
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Path: subworkflows/exomeseq-gatk4-03-organizedirectories.cwl Branch/Commit ID: gatk4-fixes |
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hisat2_samtools_htseq-dexseq.stringtie-prepDE-DESeq2.cwl
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Path: workflows/hisat2_samtools_htseq-dexseq.stringtie-prepDE-DESeq2.cwl Branch/Commit ID: master |
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cnv_manta
CNV Manta calling |
Path: structuralvariants/cwl/subworkflows/cnv_manta.cwl Branch/Commit ID: 1.0.6 |
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functional analysis prediction with InterProScan
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Path: workflows/functional_analysis.cwl Branch/Commit ID: 5dc7c5c |
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bulk-atac-seq-pipeline.cwl
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Path: bulk-atac-seq-pipeline.cwl Branch/Commit ID: 102d8cb |
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chksum_seqval_wf_paired_fq.cwl
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Path: cwls/chksum_seqval_wf_paired_fq.cwl Branch/Commit ID: master |
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rw-distr.cwl
run scatter-gather for rw stage |
Path: stage/rw-distr.cwl Branch/Commit ID: master |
