Explore Workflows

https://github.com/cr-ste-justine/chujs-alignment-workflow.git

Path: workflows/wgs_variant_calling_bam.cwl

Branch/Commit ID: dev

Mark duplicates

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/abstract_operations/subworkflows/picard_markduplicates.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/scatter-valuefrom-wf5.cwl

Branch/Commit ID: main

Workflow runs homer-make-tag-directory.cwl tool using scatter for the following inputs - bam_file - fragment_size - total_reads `dotproduct` is used as a `scatterMethod`, so one element will be taken from each array to construct each job: 1) bam_file[0] fragment_size[0] total_reads[0] 2) bam_file[1] fragment_size[1] total_reads[1] ... N) bam_file[N] fragment_size[N] total_reads[N] `bam_file`, `fragment_size` and `total_reads` arrays should have the identical order.

https://github.com/mr-c/datirium-workflows.git

Path: tools/heatmap-prepare.cwl

Branch/Commit ID: license_test

https://github.com/proteinswebteam/ebi-metagenomics-cwl.git

Path: tools/rRNA_selection.cwl

Branch/Commit ID: 8515542

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/count-lines9-wf.cwl

Branch/Commit ID: master

https://github.com/sbg/sbg_dockstore_tools.git

Path: pcawg/vc/icgc_pcawg_dkfz_embl_workflow.cwl

Branch/Commit ID: v1.0.0

https://gitlab.ebrains.eu/sofiakar/yre-standardised-workflows.git

Path: Workflows/PSD_workflow_2/workflow.cwl

Branch/Commit ID: main

https://github.com/Marco-Salvi/cwl-ro-crate.git

Path: ST520103.cwl

Branch/Commit ID: main

https://github.com/adamscharlotte/CWL-workflow.git

Path: Protein_Inference_workflow.cwl

Branch/Commit ID: master