Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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example.cwl
Example CWL workflow that uses some advanced features |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/example.cwl Branch/Commit ID: 3bc4fab5503e58521ed0eb9c0d035ac18460dc13 |
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SoupX (workflow) - an R package for the estimation and removal of cell free mRNA contamination
Wrapped in a workflow SoupX tool for easy access to Cell Ranger pipeline compressed outputs. |
https://github.com/Barski-lab/workflows.git
Path: tools/soupx-subworkflow.cwl Branch/Commit ID: 5a92b026bd62fe1597de940088e8adeef6939d5a |
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scatter-wf4.cwl#main
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/scatter-wf4.cwl Branch/Commit ID: 4d4bbc301c81cbbae9b7f40fb3da3fa16d900fe3 Packed ID: main |
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scatter-wf3_v1_0.cwl#main
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/scatter-wf3_v1_0.cwl Branch/Commit ID: c46a3ad4e488e75b7a58032c129f0605f5e84f40 Packed ID: main |
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blastp_wnode_struct
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_struct.cwl Branch/Commit ID: 8af4e2aabf43d5e3c7162efae4ad4649df5601e2 |
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worldpopulation-slurmcern.cwl
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https://github.com/reanahub/reana-demo-worldpopulation.git
Path: workflow/cwl/worldpopulation-slurmcern.cwl Branch/Commit ID: e93c3c14164be65f65703ced5d9d2544824ff480 |
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bam_readcount workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 31a179d7a2f2ac86bfd7fcc4dc79832c3739ae76 |
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bact_get_kmer_reference
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https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 5d5c4b4ed6d6de42eda2c68aefcf738c201517fb |
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wf.cwl
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https://github.com/ResearchObject/runcrate.git
Path: tests/data/no-output-run-1/snapshot/wf.cwl Branch/Commit ID: e0da7976dfc711376d84d6dcb78e48a98c306814 |
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running cellranger mkfastq and count
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: 51724b44c96e5fd849ae55b752865b80bc47d66c |
