Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph taxcheck.cwl

Perform taxonomic identification tasks on an input genome

https://github.com/ncbi/pgap.git

Path: taxcheck.cwl

Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36
workflow graph Detect DoCM variants

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/docm_germline.cwl

Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9
workflow graph Varscan Workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_germline.cwl

Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9
workflow graph test-main.cwl

https://github.com/kyusque/abmp_log_dump2pieda.git

Path: test-main.cwl

Branch/Commit ID: 36d894eed604a2ba8ccaeaa3449f25b4128d224d
workflow graph Run pindel on provided region

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_region.cwl

Branch/Commit ID: 28d1065759cbd389594ee33b41fd1103ced5436d
workflow graph tt_kmer_top_n.cwl

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_top_n.cwl

Branch/Commit ID: 192b813eed8c0d368e69057cb39415175dd15128
workflow graph basename-fields-test.cwl

https://github.com/common-workflow-language/cwltool.git

Path: cwltool/schemas/v1.0/v1.0/basename-fields-test.cwl

Branch/Commit ID: 17268d1493d9e558113b2c35c0be6b3fb961b2a3
workflow graph rnaseq-se-dutp.cwl

Runs RNA-Seq dUTP BioWardrobe basic analysis with strand specific single-end data file.

https://github.com/Barski-lab/workflows.git

Path: workflows/rnaseq-se-dutp.cwl

Branch/Commit ID: 94c6ea7bf4b64599746d778568efbd8e10f0d5ba
workflow graph Add snv and indel bam-readcount files to a vcf

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/vcf_readcount_annotator.cwl

Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9
workflow graph record-output-wf_v1_0.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/record-output-wf_v1_0.cwl

Branch/Commit ID: 139c64b55f7693d22e6646b8afe585f90da11dcb