Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph facets-suite-workflow.cwl

Workflow for running the facets suite workflow on a single tumor normal pair Includes handling of errors in case execution fails for the sample pair

https://github.com/mskcc/pluto-cwl.git

Path: cwl/facets-suite-workflow.cwl

Branch/Commit ID: e19ef998e906eb915cf4351a3599abd9bff57205
workflow graph metabarcode (gene amplicon) analysis for fastq files

protein - qc, preprocess, annotation, index, abundance

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/metabarcode-fastq.workflow.cwl

Branch/Commit ID: 8a5ded15fad8ee1a4315aef1fdc1d53cdcdc12b8
workflow graph fillout_post_processing.cwl

https://github.com/mskcc/pluto-cwl.git

Path: cwl/fillout_post_processing.cwl

Branch/Commit ID: 9f7b5b5f985727a2df34ae86586c296ce757004c
workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: 026bba9511561246ad65458f0f55c88cead26fbd
workflow graph LBA_target.cwl

https://git.astron.nl/RD/LINC.git

Path: workflows/LBA_target.cwl

Branch/Commit ID: c82ad7773b534a2eb015c96594417d0b1f5e0f2f
workflow graph Per-chromosome pindel

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/pindel_cat.cwl

Branch/Commit ID: 0fae6bb8a15c634b054ec747e31bdfbc67954c92
workflow graph io-file-default-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/io-file-default-wf.cwl

Branch/Commit ID: 979083396fee912fca8ef778174216d317338a00
workflow graph conditional_step_no_inputs.cwl

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/conditional_step_no_inputs.cwl

Branch/Commit ID: 190415a46a7249ab85fde87d797ec1ea688a8cc5
workflow graph count-lines18-wf.cwl

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/count-lines18-wf.cwl

Branch/Commit ID: ea9f8634e41824ac3f81c3dde698d5f0eef54f1b
workflow graph cram_to_bam workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: 86fbeb95ef85111f3b4c6bc2bba8f06cef64e157