Explore Workflows

\"Main workflow for Metagenome and Metatranscriptome Annotation related CWL file: ./Tools/00_fastp.cwl ./Tools/05_bwa_mem_index.cwl ./Tools/13_subread.cwl ./Workflow/annotation_sw.cwl ./Workflow/megahit_prodigal_sw.cwl ./Workflow/metagenomic_contig_mapping_sw.cwl\"

https://github.com/RyoMameda/ComplexMicrobiome_GeneExpression_CWL.git

Path: Workflow/main_w.cwl

Branch/Commit ID: main

https://github.com/YeoLab/eclip.git

Path: cwl/wf_get_peaks_trim_partial_se.cwl

Branch/Commit ID: master

https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git

Path: workflows/emg-pipeline-v4-single.cwl

Branch/Commit ID: master

https://gitlab.com/unduthegun/stellaris-emblem-lab.git

Path: textures/emblem_textures.cwl

Branch/Commit ID: cwl

ATAC-seq 02 trimming - reads: PE

https://github.com/alexbarrera/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/02-trim-pe.cwl

Branch/Commit ID: master

https://github.com/wtsi-hgi/arvados-pipelines.git

Path: cwl/workflows/intersect_intervals.cwl

Branch/Commit ID: master

https://github.com/Sentieon/Sentieon-cwl.git

Path: stage/tnscope-distr.cwl

Branch/Commit ID: master

https://github.com/Duke-GCB/bespin-cwl.git

Path: subworkflows/exomeseq-gatk4-01-preprocessing.cwl

Branch/Commit ID: master

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/record-output-wf.cwl

Branch/Commit ID: master

CNV Manta calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/cwl/subworkflows/cnv_manta.cwl

Branch/Commit ID: master