Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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bulk_process.cwl
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https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git
Path: steps/bulk_process.cwl Branch/Commit ID: d0e845d |
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TransDecoder 2 step workflow, running TransDecoder.LongOrfs (step 1) followed by TransDecoder.Predict (step2)
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https://github.com/EBI-Metagenomics/workflow-is-cwl.git
Path: workflows/TransDecoder-v5-wf-2steps.cwl Branch/Commit ID: assembly |
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genomics-workspace-transcript.cwl
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https://github.com/NAL-i5K/Organism_Onboarding.git
Path: flow_genomicsWorkspace/genomics-workspace-transcript.cwl Branch/Commit ID: master |
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flagging.cwl
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https://github.com/ska-sa/den.git
Path: cwl/workflows/flagging.cwl Branch/Commit ID: kat7-test |
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gp_makeblastdb
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https://github.com/ncbi/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: dev |
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qa_check_subwf.cwl
This subworkflow will perform a QA check on the OxoG outputs. It will perform the QA check on a single tumour and it associated VCFs |
https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git
Path: qa_check_subwf.cwl Branch/Commit ID: develop |
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output.cwl
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https://github.com/CERIT-SC/fireprot.git
Path: output.cwl Branch/Commit ID: master |
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vqsr-flow.cwl
run vqsr flow, including vqsr rcal, vqsr apply and plot |
https://github.com/sentieon/sentieon-cwl.git
Path: stage/vqsr-flow.cwl Branch/Commit ID: master |
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Resize sentinel2ard collection
Resize sentinel2ard collection |
https://github.com/EO-DataHub/eodh-training.git
Path: cwl/resize-sentinel2ard.cwl Branch/Commit ID: main Packed ID: resize-sentinel2ard |
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mast.cwl
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https://github.com/alahiff/fastwf.git
Path: mast.cwl Branch/Commit ID: master |
