Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph qiime2 create phylogenetic tree

Generate a tree for phylogenetic diversity analyses from https://docs.qiime2.org/2018.4/tutorials/moving-pictures/

 https://github.com/duke-gcb/bespin-cwl.git

Path: packed/qiime2-step2-deblur.cwl

Branch/Commit ID: e2dc95d4f12210359360d814382e7201d836dfcf

Packed ID: qiime2-05-phylogeny.cwl
workflow graph wf.cwl

https://github.com/ResearchObject/runcrate.git

Path: cwl/multisource/wf.cwl

Branch/Commit ID: 1fcacb124a71569d0a175aaee68a9f3a498bb2d3
workflow graph revsort.cwl

Reverse the lines in a document, then sort those lines.

 https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/revsort.cwl

Branch/Commit ID: d3c7bd5d6c409e857b98f9034a55952ca95afdb3
workflow graph Seed Protein Alignments

https://github.com/ncbi/pgap.git

Path: protein_alignment/wf_seed_seqids.cwl

Branch/Commit ID: 6d5e27ee7c01effb14c40619df9c4f6d321a25bf
workflow graph Add snv and indel bam-readcount files to a vcf

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/vcf_readcount_annotator.cwl

Branch/Commit ID: 0fae6bb8a15c634b054ec747e31bdfbc67954c92
workflow graph bam_readcount workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_readcount.cwl

Branch/Commit ID: 0fae6bb8a15c634b054ec747e31bdfbc67954c92
workflow graph preprocessing.cwl

https://github.com/MontgomeryLab/tinyRNA.git

Path: tiny/cwl/workflows/preprocessing.cwl

Branch/Commit ID: 943cb16fc421f0a37df3619086cbd0330c78174e
workflow graph bam to trimmed fastqs and biscuit alignments

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl

Branch/Commit ID: 0fae6bb8a15c634b054ec747e31bdfbc67954c92
workflow graph Process DL0 to DL2

Process an input file to from DL0 to separate DL1 and DL2 outputs.

https://gitlab.cta-observatory.org/cta-computing/dpps/dpps-workflows.git

Path: datapipe/workflow_dl0_to_dl2.cwl

Branch/Commit ID: 00038b11f42dee4e66a16b22214cc1779cf43461
workflow graph taxonomy_check_16S

https://github.com/ncbi/pgap.git

Path: task_types/tt_taxonomy_check_16S.cwl

Branch/Commit ID: 5461e63dc4714bb81e1c9f58e436c8465107a199