Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: de81bd20ce8829ef64146115902a10e4fe7bad0b |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: de81bd20ce8829ef64146115902a10e4fe7bad0b |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: de81bd20ce8829ef64146115902a10e4fe7bad0b |
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pindel parallel workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/pindel.cwl Branch/Commit ID: de81bd20ce8829ef64146115902a10e4fe7bad0b |
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Detect Docm variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: de81bd20ce8829ef64146115902a10e4fe7bad0b |
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Subworkflow to allow calling cnvkit with cram instead of bam files
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_cnvkit.cwl Branch/Commit ID: de81bd20ce8829ef64146115902a10e4fe7bad0b |
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Detect Variants workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: de81bd20ce8829ef64146115902a10e4fe7bad0b |
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step4: STAR for CAGE-Seq reads analysis
STAR for CAGE-Seq reads analysis |
https://github.com/RyoNozu/CWL4IncorporateTSSintoGXF.git
Path: workflow/03_star4cageseq_analysis_subworkflow_se.cwl Branch/Commit ID: main |
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protein annotation
Proteins - predict, cluster, identify, annotate |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/protein-annotation.workflow.cwl Branch/Commit ID: 8a5ded15fad8ee1a4315aef1fdc1d53cdcdc12b8 |
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timelimit3-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/timelimit3-wf.cwl Branch/Commit ID: 979083396fee912fca8ef778174216d317338a00 |
