Explore Workflows
View already parsed workflows here or click here to add your own
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LBA_calibrator.cwl
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Path: workflows/LBA_calibrator.cwl Branch/Commit ID: 7b6185e2e6f9d36b1987274e82842c82ba6f8342 |
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wgs alignment and germline variant detection
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Path: definitions/pipelines/germline_wgs_gvcf.cwl Branch/Commit ID: 509938802c5e42bb8084c6a5a26ab6425c60e69a |
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workflow.cwl
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Path: flow_apollo2_data_processing/processing/workflow.cwl Branch/Commit ID: e332b88ced14c57ec7a0f2edbdcd61afb1228e77 |
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Bisulfite alignment and QC
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Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 9a657bc8c462542dc7f57fba9e04dc1669f966ba |
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exome alignment with qc, no bqsr, no verify_bam_id
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Path: definitions/pipelines/exome_alignment_mouse.cwl Branch/Commit ID: 60edaf6f57eaaf02cda1a3d8cb9a825aa64a43e2 |
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generate-qc.cwl
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Path: setup/cwl/modules/generate-qc.cwl Branch/Commit ID: 75010576d1cd99d6e3572e32fd2dabbb0f1bb8f3 |
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LBA_target.cwl
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Path: workflows/LBA_target.cwl Branch/Commit ID: 16b52facea91f7ebd2200c471b69a8c6a49b9e66 |
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process_dl0_dl1_multiple.cwl
Process multiple dl0 files using process_dl0_dl1 and then merge the individual result files into one common output file using the merge tool. This is useful for processing simulation files in DIRAC as processing a single file per DIRAC job would result in very many, very short jobs that are not ideal for the workflow management system. |
Path: datapipe/process_dl0_dl1_multiple.cwl Branch/Commit ID: b02c6a2e533737c47e0cabd47ee04825edf17692 |
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import_schema-def.cwl
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Path: tests/import_schema-def.cwl Branch/Commit ID: 3867f2fa4c204bc99dc664bb3f0ba71e360e142e |
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any-type-compat.cwl
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Path: tests/any-type-compat.cwl Branch/Commit ID: 3867f2fa4c204bc99dc664bb3f0ba71e360e142e |
