Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph wgs alignment and tumor-only variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/wgs.cwl

Branch/Commit ID: 0798b3933ae3e6486596294984c7ffee50b94ef5
workflow graph workflow.cwl

https://github.com/NAL-i5K/CWL_Common-Workflow-Language.git

Path: flow_download_genomic/workflow.cwl

Branch/Commit ID: e6c16df8cb170ad456c23ed35bf63eff9a8ed848
workflow graph workflow.cwl

https://github.com/NAL-i5K/CWL_Common-Workflow-Language.git

Path: flow_download_others/workflow.cwl

Branch/Commit ID: e6c16df8cb170ad456c23ed35bf63eff9a8ed848
workflow graph workflow.cwl

https://github.com/NAL-i5K/CWL_Common-Workflow-Language.git

Path: flow_copy2apollo-dev/workflow.cwl

Branch/Commit ID: e6c16df8cb170ad456c23ed35bf63eff9a8ed848
workflow graph workflow.cwl

https://github.com/NAL-i5K/CWL_Common-Workflow-Language.git

Path: flow_copy2data/workflow.cwl

Branch/Commit ID: e6c16df8cb170ad456c23ed35bf63eff9a8ed848
workflow graph workflow.cwl

https://github.com/NAL-i5K/CWL_Common-Workflow-Language.git

Path: flow_apollo2/workflow.cwl

Branch/Commit ID: e6c16df8cb170ad456c23ed35bf63eff9a8ed848
workflow graph HS Metrics workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/hs_metrics.cwl

Branch/Commit ID: de81bd20ce8829ef64146115902a10e4fe7bad0b
workflow graph cram_to_bam workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cram_to_bam_and_index.cwl

Branch/Commit ID: de81bd20ce8829ef64146115902a10e4fe7bad0b
workflow graph Unaligned to aligned BAM

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/align.cwl

Branch/Commit ID: de81bd20ce8829ef64146115902a10e4fe7bad0b
workflow graph Subworkflow that runs cnvkit in single sample mode and returns a vcf file

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/cnvkit_single_sample.cwl

Branch/Commit ID: 5a4fed24f01f6d7c7ce1f595b272d82d97d4f9bd