Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Subsample BAM file creating a tagAlign and pseudoreplicates

This workflow creates a subsample from a BAM file creating a tagAlign and pseudoreplicates

 https://github.com/ncbi/cwl-ngs-workflows-cbb.git

Path: workflows/File-formats/subample-pseudoreplicates.cwl

Branch/Commit ID: e1c19e64f6fc210f65472ee227786d33c9b4909a
workflow graph LBA_calibrator.cwl

https://git.astron.nl/RD/LINC.git

Path: workflows/LBA_calibrator.cwl

Branch/Commit ID: ccb8d7210076c048b5a9f0810ddb7fa9d6531882
workflow graph Optimize cuts and Generate IRF

Optimize event selection and compute an IRF using the results.

https://gitlab.cta-observatory.org/cta-computing/dpps/datapipe/datapipe.git

Path: workflows/workflow_optimize_and_irf.cwl

Branch/Commit ID: 3b83e017d1205b2187b2c755ebb3d7e9432423ba
workflow graph xenbase-sra-to-fastq-se.cwl

https://github.com/Barski-lab/workflows.git

Path: subworkflows/xenbase-sra-to-fastq-se.cwl

Branch/Commit ID: 009a72ff0cedb50704a4ab7e9869417a7e677952
workflow graph workflow_simple.cwl

https://github.com/fstrozzi/scalability-reproducibility-chapter.git

Path: CWL/workflow_simple.cwl

Branch/Commit ID: 7795938377fba40e4bc5ac4735868d2c0e10bf8c
workflow graph process VCF workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/strelka_process_vcf.cwl

Branch/Commit ID: 0fae6bb8a15c634b054ec747e31bdfbc67954c92
workflow graph genotypegvcfs.cwl

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/variant_calling/genotypegvcfs.cwl

Branch/Commit ID: c84973e6e96d5232152a87bdd40ee8f5bab470c0
workflow graph downsample unaligned BAM and align

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/downsampled_alignment.cwl

Branch/Commit ID: 60d8a9e6c5f571ec9b37f10290a1f4613013f3e1
workflow graph workflow_input_format_expr_v1_1.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/workflow_input_format_expr_v1_1.cwl

Branch/Commit ID: 6a46105708870aa3cf97c8ba91884272b2857975
workflow graph LBA_calibrator.cwl

https://git.astron.nl/eosc/prefactor3-cwl.git

Path: workflows/LBA_calibrator.cwl

Branch/Commit ID: 4d7bd88fee5430bda4270a825b18b93c57596dfc