Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	preprocess-illumina.cwl	https://github.com/fjrmoreews/cwl-workflow-SARS-CoV-2.git Path: PreProcessing/preprocess-illumina.cwl Branch/Commit ID: preprocessing
	SSU-from-tablehits.cwl	https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git Path: tools/SSU-from-tablehits.cwl Branch/Commit ID: e1b0fce
	download-GRCh38.cwl	https://github.com/hacchy1983/CWL-workflows.git Path: Workflows/download-GRCh38.cwl Branch/Commit ID: master
	standard_bam_to_collapsed_qc.cwl This is a workflow to go from standard bams to collapsed bams and QC results.	https://github.com/mskcc/ACCESS-Pipeline.git Path: workflows/subworkflows/standard_bam_to_collapsed_qc.cwl Branch/Commit ID: master
	bird_workflow.cwl	https://github.com/ReddyLab/bird-workflow.git Path: bird_workflow.cwl Branch/Commit ID: main
	Produce a list of residue-mapped structural domain instances from Pfam ids Retrieve and process the PDB structures corresponding to the Pfam family ids resulting in a list of residue-mapped structural domain instances along with lost structural instances (requires Data/pdbmap downloaded from Pfam and uses SIFTS resource for UniProt to PDB residue Mapping)	https://github.com/HrishiDhondge/CroMaSt.git Path: Tools/resmapping_pfam_instances_subwf.cwl Branch/Commit ID: main
	binning.cwl	https://github.com/EBI-Metagenomics/CWL-binning.git Path: workflows/binning.cwl Branch/Commit ID: develop
	cnv_exomedepth CNV ExomeDepth calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/cnv_exome_depth.cwl Branch/Commit ID: 1.1.3
	star_samtools_featurecounts_edger.cwl	https://github.com/rawgene/cwl.git Path: workflows/star_samtools_featurecounts_edger.cwl Branch/Commit ID: master
	SPRM pipeline	https://github.com/hubmapconsortium/sprm.git Path: pipeline.cwl Branch/Commit ID: 0cb2efa

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