Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	bwa_index	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/bwa_index.cwl Branch/Commit ID: d07f44fc5c253dc4044d86ea79ac6f9e03c01bfa
	align_sort_sa	https://github.com/ncbi/pgap.git Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 609aead9804a8f31fa9b3dbc7e52105aec487f31
	samtools_sort	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/samtools_sort.cwl Branch/Commit ID: d07f44fc5c253dc4044d86ea79ac6f9e03c01bfa
	MoveData-workflow.cwl	https://github.com/NAL-i5K/Organism_Onboarding.git Path: MoveData-workflow.cwl Branch/Commit ID: 89cff9f0d36a23bf57b3f4bdbd3ed57e3347c945
	workflow.cwl	https://github.com/nal-i5k/organism_onboarding.git Path: flow_dispatch/2other_species/workflow.cwl Branch/Commit ID: c6077d2756e628f469b446e1584ac8a86582d729
	align_merge_sas	https://github.com/ncbi/pgap.git Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 609aead9804a8f31fa9b3dbc7e52105aec487f31
	Run genomic CMsearch	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 9362082213e20315f76f6f5c235cac3aae565747
	picard_markduplicates Mark duplicates	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/picard_markduplicates.cwl Branch/Commit ID: d07f44fc5c253dc4044d86ea79ac6f9e03c01bfa
	cnv_manta CNV Manta calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/cnv_manta.cwl Branch/Commit ID: 8ca112300d819e3a24a78483685adc42d6199e46
	cnv_exomedepth CNV ExomeDepth calling	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/subworkflows/cnv_exome_depth.cwl Branch/Commit ID: 8ca112300d819e3a24a78483685adc42d6199e46