Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph Bacterial Annotation, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_2nd_pass.cwl

Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36
workflow graph Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass4.cwl

Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36
workflow graph Non-Coding Bacterial Genes

https://github.com/ncbi/pgap.git

Path: bacterial_noncoding/wf_bacterial_noncoding.cwl

Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36
workflow graph Run tRNAScan

https://github.com/ncbi/pgap.git

Path: bacterial_trna/wf_trnascan.cwl

Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36
workflow graph checkm

https://github.com/ncbi/pgap.git

Path: checkm/wf_checkm.cwl

Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36
workflow graph spurious_annot pass2

https://github.com/ncbi/pgap.git

Path: spurious_annot/wf_spurious_annot_pass2.cwl

Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36
workflow graph Get Proteins

https://github.com/ncbi/pgap.git

Path: wf_bacterial_prot_src.cwl

Branch/Commit ID: 6a456869b53513bff31fec02cc5ea3cc26fede36
workflow graph kfdrc_flagstat_qc.cwl

https://github.com/kids-first/kf-rnaseq-workflow.git

Path: workflow/kfdrc_flagstat_qc.cwl

Branch/Commit ID: 5f762c6896dfc60b2551f6aeb47989fddc000d8a
workflow graph bam_readcount workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/bam_readcount.cwl

Branch/Commit ID: 26806d99f8e2a241715fd081e712d4e3763db5b8
workflow graph ani_top_n

https://github.com/ncbi/pgap.git

Path: task_types/tt_ani_top_n.cwl

Branch/Commit ID: e2832ecc1c5f64a9e522bb1b24cd45f8bb2ca429