Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	extract_gencoll_ids	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: a539d600357a48a558daf43fc41a89aae79f9e86
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416
	fastqtosam_pe.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/fastqtosam/fastqtosam_pe.cwl Branch/Commit ID: d5757ab1f3aad3c542950e1dbe8f9d2eec74bede
	umi per-lane alignment subworkflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: adcae308fdccaa1190083616118dfadb4df65dca
	count-lines1-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/count-lines1-wf.cwl Branch/Commit ID: 07ebbea2bdf97955060c1dd563580b386388519b
	Varscan Workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416
	phase VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0
	bam to trimmed fastqs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_to_trimmed_fastq.cwl Branch/Commit ID: f615832615c3b41728df8e47b72ef11e37e6a9e5