Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Detect Docm variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_cle.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
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bact_get_kmer_reference
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https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 2d54b11cc9891c9aa52515fe4f8cd9cba12c6629 |
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bact_get_kmer_reference
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 70e530b65b33301032b7510095d89e497bf5e34e |
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blastp_wnode_struct
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_struct.cwl Branch/Commit ID: e2a6cbcc36212433d8fbc804919442787a5e2a49 |
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Apply filters to VCF file
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
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mutect parallel workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/mutect.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
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strelka workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/strelka_and_post_processing.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
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Varscan Workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: 7638b3075863ae8172f4adaec82fb2eb8e80d3d5 |
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format_rrnas_from_seq_entry
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https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: 70e530b65b33301032b7510095d89e497bf5e34e |
