Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
exome alignment and somatic variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/somatic_exome_nonhuman.cwl Branch/Commit ID: 04d21c33a5f2950e86db285fa0a32a6659198d8a |
|
|
|
blastp_wnode_naming
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 001fab592188cb525afa1c4db6226b833faec106 |
|
|
|
format_rrnas_from_seq_entry
|
https://github.com/ncbi/pgap.git
Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: bc0f1f147231c759fb2d5ff99f41b2667a5588ad |
|
|
|
count-lines1-wf.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/count-lines1-wf.cwl Branch/Commit ID: efd59864c24d97e6d0d1d273025d3ef9003fa44d |
|
|
|
Unaligned BAM to BQSR
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: 35e6b3ef71b4a2a9caba1dbd5dc424a8809bcc0a |
|
|
|
Creates FASTA file from BED coordinates
This workflow creates FASTA file from BED coordinates |
https://github.com/ncbi/cwl-ngs-workflows-cbb.git
Path: workflows/File-formats/fasta-from-bed.cwl Branch/Commit ID: 265440c63ab75d2451c90bcd116e725626e9a608 |
|
|
|
step-valuefrom-wf.cwl
|
https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/step-valuefrom-wf.cwl Branch/Commit ID: 4df56e95e6fceab69e677b539f3532cbf5946197 |
|
|
|
align_sort_sa
|
https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143 |
|
|
|
Unaligned to aligned BAM
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416 |
|
|
|
align_sort_sa
|
https://github.com/ncbi-gpipe/pgap.git
Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: b360e89d85d83ba3b863bf86074c0ec7e5c58f48 |
