Explore Workflows

Example CWL workflow that uses some advanced features

https://github.com/mskcc/pluto-cwl.git

Path: cwl/example_workflow.cwl

Branch/Commit ID: 45604eaeea15030c7302941c761464ce392abf74

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/count-lines7-wf_v1_1.cwl

Branch/Commit ID: 6a46105708870aa3cf97c8ba91884272b2857975

Reverse the lines in a document, then sort those lines.

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/revsort.cwl

Branch/Commit ID: 4bb5329997cb84562a40733b5c2f55600b1a741a

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/varscan_pre_and_post_processing.cwl

Branch/Commit ID: 526df6d2937f92ecd00c3029748958faa692ac55

ATAC-seq 02 trimming - reads: SE

https://github.com/Duke-GCB/GGR-cwl.git

Path: v1.0/ATAC-seq_pipeline/02-trim-se.cwl

Branch/Commit ID: 6d9457382f0b7cc2510e148d21383261280d17ed

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/qc_exome_no_verify_bam.cwl

Branch/Commit ID: 6d03a918639a69ddf6a7b93fe9f72128ef37edc3

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatter2.cwl

Branch/Commit ID: 6df3514cebcd94bf518b0ab7eaf220be1ca64afa

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_download/workflow.cwl

Branch/Commit ID: e332b88ced14c57ec7a0f2edbdcd61afb1228e77

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/transform_pack.cwl

Branch/Commit ID: a57b8f0d8708078e87f13297e065d72db10e38a0

Packed ID: main

https://github.com/CompEpigen/ChIPseq_workflows.git

Path: CWL/workflows/ChIPseq_pipeline_packed.cwl

Branch/Commit ID: 503df61c4d7fd6078a4089b62382a3c6811d7749

Packed ID: trim_and_map.cwl