Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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step4: STAR for CAGE-Seq reads analysis
STAR for CAGE-Seq reads analysis |
https://github.com/RyoNozu/CWL4IncorporateTSSintoGXF.git
Path: workflow/03_star4cageseq_analysis_subworkflow_pe.cwl Branch/Commit ID: 9728a86f7b73f7657a1f261e77a14ca59bdd561b |
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trnascan_wnode and gpx_qdump combined
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https://github.com/ncbi/pgap.git
Path: bacterial_trna/wf_scan_and_dump.cwl Branch/Commit ID: 54c5074587af001a44eccb4762a4cb25fa24cb3e |
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count-lines7-single-source-wf_v1_1.cwl
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https://github.com/common-workflow-language/cwl-utils.git
Path: testdata/count-lines7-single-source-wf_v1_1.cwl Branch/Commit ID: main |
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hi-c-processing-bam.cwl
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https://github.com/4dn-dcic/pipelines-cwl.git
Path: cwl_awsem_v1/hi-c-processing-bam.cwl Branch/Commit ID: dev2 |
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exomeseq-gatk4-03-organizedirectories.cwl
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https://github.com/Duke-GCB/bespin-cwl.git
Path: subworkflows/exomeseq-gatk4-03-organizedirectories.cwl Branch/Commit ID: gatk4-fixes |
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scRNA-seq pipeline using Salmon and Alevin
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https://github.com/hubmapconsortium/salmon-rnaseq.git
Path: pipeline.cwl Branch/Commit ID: 72cf42a |
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Functional analyis of sequences that match the 16S SSU
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/16S_taxonomic_analysis.cwl Branch/Commit ID: fa86fce |
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Detect Variants workflow
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https://github.com/litd/analysis-workflows.git
Path: definitions/pipelines/detect_variants.cwl Branch/Commit ID: master |
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retrieve metadata from Zenodo community
For a given Zenodo community, retrieve its repository records as Zenodo JSON and (eventually) schema.org JSON-LD and DataCite v4 XML. |
https://github.com/stain/ro-index-paper.git
Path: code/data-gathering/workflows/zenodo-records.cwl Branch/Commit ID: master |
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pipeline.cwl
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https://github.com/hubmapconsortium/azimuth-annotate.git
Path: pipeline.cwl Branch/Commit ID: main |
