Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	trimmed_fastq Quality Control (raw data), Raw Data trimming and Quality Control (pre-processed)	https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git Path: structuralvariants/cwl/subworkflows/trimmed_fastq.cwl Branch/Commit ID: 1.1.3
	per_cluster_workflow.cwl	https://github.com/FarahZKhan/scalability-reproducibility-chapter.git Path: CWL/per_cluster_workflow.cwl Branch/Commit ID: ProvCaptureDemo
	running cellranger mkfastq and count	https://github.com/fgomez02/analysis-workflows.git Path: definitions/subworkflows/cellranger_mkfastq_and_count.cwl Branch/Commit ID: No_filters_detect_variants
	canine_mutation_burden_module.cwl	https://github.com/d3b-center/canine-dev.git Path: subworkflows/canine_mutation_burden_module.cwl Branch/Commit ID: master
	BuildCembaReferences.cwl	https://github.com/common-workflow-lab/wdl-cwl-translator.git Path: wdl2cwl/tests/cwl_files/BuildCembaReferences.cwl Branch/Commit ID: main
	create_snap_and_analyze.cwl	https://github.com/hubmapconsortium/sc-atac-seq-pipeline.git Path: create_snap_and_analyze.cwl Branch/Commit ID: 302f1f3
	05-quantification.cwl ATAC-seq - Quantification	https://github.com/alexbarrera/GGR-cwl.git Path: v1.0/ATAC-seq_pipeline/05-quantification.cwl Branch/Commit ID: master
	cmsearch-multimodel.cwl	https://github.com/proteinswebteam/ebi-metagenomics-cwl.git Path: workflows/cmsearch-multimodel.cwl Branch/Commit ID: 71d9c83
	scRNA-seq pipeline using Salmon and Alevin	https://github.com/hubmapconsortium/salmon-rnaseq.git Path: pipeline.cwl Branch/Commit ID: 16dd8ca
	minibam_sub_wf.cwl This is a subworkflow of the main oxog_varbam_annotat_wf workflow - this is not meant to be run as a stand-alone workflow!	https://github.com/ICGC-TCGA-PanCancer/OxoG-Dockstore-Tools.git Path: minibam_sub_wf.cwl Branch/Commit ID: develop

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