Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph hmmsearch_wnode and gpx_qdump combined workflow to apply scatter/gather

https://github.com/ncbi/pgap.git

Path: task_types/tt_hmmsearch_wnode_plus_qdump.cwl

Branch/Commit ID: 4a44218a713aecc488359be275409414ae8c1434
workflow graph readgroups_bam_to_readgroups_fastq_lists.cwl

https://github.com/nci-gdc/gdc-dnaseq-cwl.git

Path: workflows/bamfastq_align/readgroups_bam_to_readgroups_fastq_lists.cwl

Branch/Commit ID: 3cb464a3a5c39cc060cd23d9c60918bc9ffb169b
workflow graph ensembl_genomes_to_variation_graph_with_uniprot_annotation_virtuoso.cwl

https://github.com/vgteam/Veguns.git

Path: ensembl_genomes_to_variation_graph_with_uniprot_annotation_virtuoso.cwl

Branch/Commit ID: 0983a82e31584e3348c07fe88fb409e6c9cbdb03
workflow graph revcomp_with_rename.cwl

https://github.com/common-workflow-language/workflows.git

Path: workflows/sanbi_cwltutorial/revcomp/revcomp_with_rename.cwl

Branch/Commit ID: 08308b3e425e952445d669d6d8e429018d02037b
workflow graph ensembl_genomes_to_variation_graph_with_uniprot_annotation_virtuoso.cwl

https://github.com/vgteam/Veguns.git

Path: ensembl_genomes_to_variation_graph_with_uniprot_annotation_virtuoso.cwl

Branch/Commit ID: 3d02affd4ecdd32feb49732a6458084b5a55987f
workflow graph bgzip and index VCF

https://github.com/genome/cancer-genomics-workflow.git

Path: varscan/bgzip_and_index.cwl

Branch/Commit ID: d1ee6a2a323cee7e4af00c7e0b926c2192038e1d
workflow graph chipseq-se.cwl

ChIP-Seq basic analysis workflow for a single-read experiment.

https://github.com/datirium/workflows.git

Path: workflows/chipseq-se.cwl

Branch/Commit ID: cf107bc24a37883ef01b959fd89c19456aaecc02
workflow graph wf_makeblastdb.cwl

https://github.com/ncbi/pipelines.git

Path: amr_finder/wf_makeblastdb.cwl

Branch/Commit ID: 89cfa59e0914132159c1133352e9f74023d37947
workflow graph conflict-wf.cwl#collision

https://github.com/common-workflow-language/common-workflow-language.git

Path: v1.0/v1.0/conflict-wf.cwl

Branch/Commit ID: 5adc637f544e6534927485516a0b583cde25a10b

Packed ID: collision
workflow graph abundance

abundace profiles from annotated files, for protein and/or rna

 https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/abundance.workflow.cwl

Branch/Commit ID: b3be7639b3dc63d4a9ce5d811edee3393b032e6d