Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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format-maf
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/portal-formatting.cli/1.0.0/format-maf.cwl Branch/Commit ID: e96613177b18b76c6fac98b945660bde65ebdd80 |
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Run genomic CMsearch (5S rRNA)
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 708e141d99f6e5f30d9402d9f890562606a0d97e |
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BLAST against rRNA db
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https://github.com/ncbi/pgap.git
Path: bacterial_noncoding/wf_blastn.cwl Branch/Commit ID: 708e141d99f6e5f30d9402d9f890562606a0d97e |
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protein_extract
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https://github.com/ncbi/pgap.git
Path: progs/protein_extract.cwl Branch/Commit ID: 708e141d99f6e5f30d9402d9f890562606a0d97e |
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blastp_wnode_naming
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https://github.com/ncbi/pgap.git
Path: task_types/tt_blastp_wnode_naming.cwl Branch/Commit ID: 708e141d99f6e5f30d9402d9f890562606a0d97e |
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module-1-scatter-chunk
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/module-1.scatter.chunk.cwl Branch/Commit ID: e96613177b18b76c6fac98b945660bde65ebdd80 |
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tt_hmmsearch_wnode.cwl
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https://github.com/ncbi/pgap.git
Path: task_types/tt_hmmsearch_wnode.cwl Branch/Commit ID: 708e141d99f6e5f30d9402d9f890562606a0d97e |
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Unaligned BAM to BQSR and VCF
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_bqsr.cwl Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9 |
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module-2
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https://github.com/mskcc/roslin-variant.git
Path: setup/cwl/module-2.cwl Branch/Commit ID: e96613177b18b76c6fac98b945660bde65ebdd80 |
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WGS QC workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/qc_wgs.cwl Branch/Commit ID: 27aa22e6f5d2fca75abca42d52867259fd0725b9 |
