Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
|---|---|---|---|
|
|
Apply filters to VCF file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 051074fce4afd9732ef34db9dd43d3a1d8e979d6 |
|
|
|
exome alignment with qc
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/exome_alignment.cwl Branch/Commit ID: 67f56d3b9c70ad56019ed8aa8d50a128e02be43b |
|
|
|
bam to trimmed fastqs and biscuit alignments
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_biscuit_alignments.cwl Branch/Commit ID: f45b52a24c7b54a75368dcbab24b4eb2c5a9c75a |
|
|
|
Apply filters to VCF file
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/filter_vcf.cwl Branch/Commit ID: 0c4855bf23622828413ecb09dd30754691c28014 |
|
|
|
fp_filter workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 0c4855bf23622828413ecb09dd30754691c28014 |
|
|
|
varscan somatic workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: 0c4855bf23622828413ecb09dd30754691c28014 |
|
|
|
bgzip and index VCF
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 0c4855bf23622828413ecb09dd30754691c28014 |
|
|
|
exome alignment and tumor-only variant detection
|
https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/exome.cwl Branch/Commit ID: 0c4855bf23622828413ecb09dd30754691c28014 |
|
|
|
fp_filter workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/fp_filter.cwl Branch/Commit ID: 5f120e5bc3c0f75bfbc636ea2c6f4393f5d45ca1 |
|
|
|
varscan somatic workflow
|
https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/varscan.cwl Branch/Commit ID: 5f120e5bc3c0f75bfbc636ea2c6f4393f5d45ca1 |
