Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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exome alignment and germline variant detection
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/germline_detect_variants.cwl Branch/Commit ID: e0b3c76e38630fb6234414b5adebfb6a4fb23117 |
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xenbase-fastq-bowtie-bigwig-se-pe.cwl
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https://github.com/datirium/workflows.git
Path: subworkflows/xenbase-fastq-bowtie-bigwig-se-pe.cwl Branch/Commit ID: 00ced0fc44ceeb3495e891232e1000235e56ee6b |
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etl.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/fastq_readgroup_stats/etl.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
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Detect DoCM variants
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/docm_germline.cwl Branch/Commit ID: f401b02285f30de1c12ac2859134099fe04be33f |
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transform.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/fastq_readgroup_stats/transform.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2 |
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Add snv and indel bam-readcount files to a vcf
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/vcf_readcount_annotator.cwl Branch/Commit ID: f401b02285f30de1c12ac2859134099fe04be33f |
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etl.cwl
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https://github.com/nci-gdc/gdc-dnaseq-cwl.git
Path: workflows/fastq_readgroup_stats/etl.cwl Branch/Commit ID: dd7f86b3cc10eb1cda07dc2fc279ba2529c8ad61 |
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transform.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/dnaseq/validate/transform.cwl Branch/Commit ID: dd7f86b3cc10eb1cda07dc2fc279ba2529c8ad61 |
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download_check.cwl
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https://github.com/uc-cdis/genomel_pipelines.git
Path: genomel/cwl/workflows/utils/download_check.cwl Branch/Commit ID: 7504ead048c3acd64b9b92e44d044d558cb696f2 |
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fastj2npy-wf.cwl
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https://github.com/curoverse/l7g.git
Path: cwl-version/masterworkflow/fastj2npy-wf.cwl Branch/Commit ID: c1ccad9f81cd3fc44a9f6e8d3b27acb154ba03cc |
