Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph extract_gencoll_ids

https://github.com/ncbi/pgap.git

Path: task_types/tt_extract_gencoll_ids.cwl

Branch/Commit ID: 609aead9804a8f31fa9b3dbc7e52105aec487f31

workflow graph cnv_exomedepth

CNV ExomeDepth calling

https://gitlab.bsc.es/lrodrig1/structuralvariants_poc.git

Path: structuralvariants/subworkflows/cnv_exome_depth.cwl

Branch/Commit ID: 86f2f3fb64e916607637d93cf6715bab90b1f1d3

workflow graph workflow-fasta-pratt.cwl

https://github.com/ebi-wp/webservice-cwl.git

Path: workflows/workflow-fasta-pratt.cwl

Branch/Commit ID: 5df6b762980b15b0f6389149311b82bdd6dff37d

workflow graph kmer_top_n_extract

https://github.com/ncbi/pgap.git

Path: task_types/tt_kmer_top_n_extract.cwl

Branch/Commit ID: 9362082213e20315f76f6f5c235cac3aae565747

workflow graph Subworkflow to allow calling different SV callers which require bam files as inputs

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/single_sample_sv_callers.cwl

Branch/Commit ID: f9600f9959acdc30259ba7e64de61104c9b01f0b

workflow graph tt_univec_wnode.cwl

https://github.com/ncbi/pgap.git

Path: task_types/tt_univec_wnode.cwl

Branch/Commit ID: 9362082213e20315f76f6f5c235cac3aae565747

workflow graph Non-Coding Bacterial Genes

https://github.com/ncbi/pgap.git

Path: bacterial_noncoding/wf_bacterial_noncoding.cwl

Branch/Commit ID: 609aead9804a8f31fa9b3dbc7e52105aec487f31

workflow graph zip_and_index_vcf.cwl

This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output.

https://github.com/baminou/OxoG-Dockstore-Tools.git

Path: zip_and_index_vcf.cwl

Branch/Commit ID: 95da3d32ee8787361333b2eea09afb8f9c3392a9

workflow graph tt_univec_wnode.cwl

https://github.com/ncbi/pgap.git

Path: task_types/tt_univec_wnode.cwl

Branch/Commit ID: 609aead9804a8f31fa9b3dbc7e52105aec487f31

workflow graph concat.cwl

https://github.com/mskcc/pluto-cwl.git

Path: cwl/concat.cwl

Branch/Commit ID: 7eb2b0a4d37018142233d770595ac2e00376dab4