Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 90a321ecf2d049330bcf0657cc4d764d2c3f42dd
	Metagenomics workflow Workflow pilon assembly polishing Steps: - BBmap (Read mapping to assembly) - Pilon	https://git.wur.nl/unlock/cwl.git Path: cwl/workflows/workflow_pilon_mapping.cwl Branch/Commit ID: 2242521957bb07fc589d6bb07046f6a166bc975a
	kmer_cache_retrieve	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_cache_retrieve.cwl Branch/Commit ID: 4def84df33963fc9ac9d5c5f804b911d01a0d9ad
	Genomic regions intersection and visualization Genomic regions intersection and visualization ============================================== 1. Merges intervals within each of the filtered peaks files from ChIP/ATAC experiments 2. Overlaps merged intervals and assigns the nearest genes to them	https://github.com/datirium/workflows.git Path: workflows/intervene.cwl Branch/Commit ID: cbefc215d8286447620664fb47076ba5d81aa47f
	echo-wf-default.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/echo-wf-default.cwl Branch/Commit ID: 0e37d46e793e72b7c16b5ec03e22cb3ce1f55ba3
	import_schema-def.cwl	https://github.com/common-workflow-language/cwl-v1.1.git Path: tests/import_schema-def.cwl Branch/Commit ID: 0e37d46e793e72b7c16b5ec03e22cb3ce1f55ba3
	tt_kmer_compare_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_compare_wnode.cwl Branch/Commit ID: f6950321e5c9ee733ad68a273d2ad8e802a6b982
	Cell Ranger ARC Aggregate Cell Ranger ARC Aggregate =========================	https://github.com/datirium/workflows.git Path: workflows/cellranger-arc-aggr.cwl Branch/Commit ID: 60854b5d299df91e135e05d02f4be61f6a310fbc
	scatter2.cwl	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/scatter2.cwl Branch/Commit ID: 75271e2a0887d47cca4077b60dd51ac763c09b63
	Run genomic CMsearch	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_gcmsearch.cwl Branch/Commit ID: 2801ce53744a085580a8de91cd007c45146b51e8