Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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count-lines2-wf.cwl
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Path: tests/count-lines2-wf.cwl Branch/Commit ID: main |
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RNASelector as a CWL workflow
https://doi.org/10.1007/s12275-011-1213-z |
Path: workflows/rna-selector.cwl Branch/Commit ID: 5833078 |
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forome_vcf_upload_uri.cwl
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Path: forome_vcf_upload_uri.cwl Branch/Commit ID: main |
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RNA-Seq alignment with qc
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Path: definitions/pipelines/rnaseq4.cwl Branch/Commit ID: master |
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scatter-valuefrom-wf4.cwl#main
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Path: tests/scatter-valuefrom-wf4.cwl Branch/Commit ID: main Packed ID: main |
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topmed-alignment-checker.cwl
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Path: aligner/sbg-alignment-cwl/topmed-alignment-checker.cwl Branch/Commit ID: cwlprov_testing |
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star2pass.rnaseq_harmonization.cwl
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Path: rnaseq-star-align/star2pass.rnaseq_harmonization.cwl Branch/Commit ID: master |
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bam-genomecov-bigwig.cwl
creates genome coverage bigWig file from .bam file |
Path: workflows/bam-genomecov-bigwig.cwl Branch/Commit ID: v0.0.2 |
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adapter for sequence_align_and_tag
Some workflow engines won't stage files in our nested structure, so parse it out here |
Path: definitions/subworkflows/sequence_align_and_tag_adapter.cwl Branch/Commit ID: low-vaf |
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zip_and_index_vcf.cwl
This is a very simple workflow of two steps. It will zip an input VCF file and then index it. The zipped file and the index file will be in the workflow output. |
Path: zip_and_index_vcf.cwl Branch/Commit ID: develop |
