Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	kmer_top_n	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_top_n.cwl Branch/Commit ID: 001fab592188cb525afa1c4db6226b833faec106
	FASTQ to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/fastq_to_bqsr.cwl Branch/Commit ID: f0cdc773e31e4aa116838e8aba4954c31bd3d68b
	count-lines11-null-step-wf-noET.cwl	https://github.com/common-workflow-language/common-workflow-language.git Path: v1.0/v1.0/count-lines11-null-step-wf-noET.cwl Branch/Commit ID: e67f19d8a713759d761ecad050966d1eb043b85c
	kmer_ref_compare_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 02816f0d66e36c8eeba02d211cc90e36bf1c9df5
	joint genotyping for trios or small cohorts	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/joint_genotype.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	format_rrnas_from_seq_entry	https://github.com/ncbi/pgap.git Path: task_types/tt_format_rrnas_from_seq_entry.cwl Branch/Commit ID: 546742b523ce12f6246a52c838a51920a08dad4b
	trick_revsort.cwl Reverse the lines in a document, then sort those lines.	https://github.com/common-workflow-language/cwltool.git Path: tests/wf/trick_revsort.cwl Branch/Commit ID: 981c03099f79b5aad74555787d406f695dd0b320
	single-sample-post-processing.cwl	https://github.com/YinanWang16/tso500-ctdna-post-processing.git Path: cwl/workflows/single-sample-post-processing.cwl Branch/Commit ID: 813142c137316736b4cc86bbc1930ce311a0a14e
	extract_gencoll_ids	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143