Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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checkm
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https://github.com/ncbi/pgap.git
Path: checkm/wf_checkm.cwl Branch/Commit ID: 068222510fdab75046c7f733a0cc919e36744ade |
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metabarcode (gene amplicon) analysis for fastq files
protein - qc, preprocess, annotation, index, abundance |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/metabarcode-fasta.workflow.cwl Branch/Commit ID: 7797879b801042984b5ae651754815fc3f77ea41 |
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bact_get_kmer_reference
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https://github.com/ncbi/pgap.git
Path: task_types/tt_bact_get_kmer_reference.cwl Branch/Commit ID: 5c40c5a0464c84076e0e407a0e05522b43bdc0a6 |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 068222510fdab75046c7f733a0cc919e36744ade |
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linc_calibrator.cwl
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https://git.astron.nl/eosc/prefactor3-cwl.git
Path: workflows/linc_calibrator.cwl Branch/Commit ID: cff7fed6aa41fb1ccacd5235dec289b4e7ef70eb |
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wf-loadContents4.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/wf-loadContents4.cwl Branch/Commit ID: 551d58d409ef2a0fa2e3ab93b85167dd7d4b1833 |
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echo-wf-default.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/echo-wf-default.cwl Branch/Commit ID: 551d58d409ef2a0fa2e3ab93b85167dd7d4b1833 |
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mpi_simple_wf.cwl
Simple 2 step workflow to check that workflow steps are independently picking up on the number of processes. First run the parallel get PIDs step (on the input num procs) then run (on a single proc) the line count. This should equal the input. |
https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/mpi_simple_wf.cwl Branch/Commit ID: 60dfe96952119f472a57524c19ed214e831b21a4 |
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count-lines8-wf-noET.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/count-lines8-wf-noET.cwl Branch/Commit ID: 551d58d409ef2a0fa2e3ab93b85167dd7d4b1833 |
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cache_test_workflow.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/cache_test_workflow.cwl Branch/Commit ID: 60dfe96952119f472a57524c19ed214e831b21a4 |
