Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Bisulfite alignment and QC
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 038cb3617a1966a1057386adcde97ce55d9e1139 |
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Nested workflow example
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/nested.cwl Branch/Commit ID: 0cbbd92a87b1ba1d484bf50170c2749536fbbe77 |
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sec-wf-out.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/sec-wf-out.cwl Branch/Commit ID: 0cbbd92a87b1ba1d484bf50170c2749536fbbe77 |
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step-valuefrom3-wf.cwl
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https://github.com/common-workflow-language/cwl-v1.2.git
Path: tests/step-valuefrom3-wf.cwl Branch/Commit ID: b60a42e3cc417c5b75b88fd7c6681abcc7ff5b89 |
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HBA_target_VLBI.cwl
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https://git.astron.nl/RD/LINC.git
Path: workflows/HBA_target_VLBI.cwl Branch/Commit ID: 96f1caf46ca4859e7cb49919dcb13bf53abf4393 |
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Nested workflow example
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/double-nested.cwl Branch/Commit ID: 0cbbd92a87b1ba1d484bf50170c2749536fbbe77 |
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align_merge_sas
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https://github.com/ncbi/pgap.git
Path: task_types/tt_align_merge_sas.cwl Branch/Commit ID: 4b8d11048f1047140b337a2cac6503d80a22d683 |
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three_step_color.cwl
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https://github.com/common-workflow-language/cwltool.git
Path: tests/wf/three_step_color.cwl Branch/Commit ID: 0cbbd92a87b1ba1d484bf50170c2749536fbbe77 |
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ani_top_n
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https://github.com/ncbi/pgap.git
Path: task_types/tt_ani_top_n.cwl Branch/Commit ID: 09774c78a965dd8f6c315597a53eef5998a3c1b6 |
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samples_fillout_index_batch_workflow.cwl
Wrapper to run bam indexing on all bams before submitting for samples fillout Also includes steps to pre-filter some maf input files |
https://github.com/mskcc/pluto-cwl.git
Path: cwl/samples_fillout_index_batch_workflow.cwl Branch/Commit ID: 2e1a01a788126f2901ffecc92a48fcbcb81776e1 |
