Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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Bacterial Annotation, pass 4, blastp-based functional annotation (second pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass4.cwl Branch/Commit ID: 23f0ee7a36649ab37cabdd9277b7c82d098be79c |
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Bacterial Annotation, pass 2, blastp-based functional annotation (first pass)
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https://github.com/ncbi/pgap.git
Path: bacterial_annot/wf_bacterial_annot_pass2.cwl Branch/Commit ID: 23f0ee7a36649ab37cabdd9277b7c82d098be79c |
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umi duplex alignment workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/duplex_alignment.cwl Branch/Commit ID: fa0bf2a51b72cd0869253943b67aa8e271633945 |
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gp_makeblastdb
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https://github.com/ncbi/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 23f0ee7a36649ab37cabdd9277b7c82d098be79c |
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Bisulfite alignment and QC
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https://github.com/genome/analysis-workflows.git
Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 0798b3933ae3e6486596294984c7ffee50b94ef5 |
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Unaligned to aligned BAM
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/align.cwl Branch/Commit ID: 641bdeffd942f5121e19626a094c8633386ad546 |
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bam to trimmed fastqs and HISAT alignments
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/bam_to_trimmed_fastq_and_hisat_alignments.cwl Branch/Commit ID: 5a4fed24f01f6d7c7ce1f595b272d82d97d4f9bd |
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conflict-wf.cwl#collision
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https://github.com/common-workflow-language/common-workflow-language.git
Path: v1.0/v1.0/conflict-wf.cwl Branch/Commit ID: 46947322eb5a99940eb3b5d3088e58f5189398e7 Packed ID: collision |
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search.cwl#main
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https://github.com/common-workflow-language/cwltool.git
Path: cwltool/schemas/v1.0/v1.0/search.cwl Branch/Commit ID: 819c81af5449ec912bbbbead042ad66b8d3fd8d4 Packed ID: main |
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cram_to_bam workflow
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https://github.com/genome/analysis-workflows.git
Path: definitions/subworkflows/cram_to_bam_and_index.cwl Branch/Commit ID: 641bdeffd942f5121e19626a094c8633386ad546 |
