Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	BLAST against rRNA db	https://github.com/ncbi/pgap.git Path: bacterial_noncoding/wf_blastn.cwl Branch/Commit ID: 8761d0526f932dea879403d51251316ef331f082
	Preprocess fastq Remove and trim low quality reads from fastq files. Return fasta files with reads passed and reads removed.	https://github.com/MG-RAST/pipeline.git Path: CWL/Workflows/preprocess-fastq.workflow.cwl Branch/Commit ID: f906212e2c9a88280ae36545e5422f25752aa8f4
	nestedworkflows.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/examples/nestedworkflows.cwl Branch/Commit ID: cb81b22abc52838823da9945f04d06739ab32fda
	cluster_blastp_wnode and gpx_qdump combined	https://github.com/ncbi/pgap.git Path: task_types/tt_cluster_and_qdump.cwl Branch/Commit ID: 8761d0526f932dea879403d51251316ef331f082
	count-lines13-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/count-lines13-wf.cwl Branch/Commit ID: e2ec740fccc81ff7071dcd607c5c158fbc0dfb90
	step-valuefrom3-wf.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/step-valuefrom3-wf.cwl Branch/Commit ID: d64178072bc4fc9700ab80cdf90146890b96587e
	Execute CRISPR	https://github.com/ncbi/pgap.git Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 8761d0526f932dea879403d51251316ef331f082
	wgs alignment and germline variant detection	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/germline_wgs.cwl Branch/Commit ID: c711498c04d6b8ddf92ddceb6219f074765f7993
	bams2gvcf.woBQSR_female.cwl	https://github.com/ddbj/human-reseq.git Path: Workflows/bams2gvcf.woBQSR_female.cwl Branch/Commit ID: b06a9beafaa6009587d1f0fca0941bca5e0f0a27
	mixed_library_metrics.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/dnaseq/mixed_library_metrics.cwl Branch/Commit ID: 98af742f0b342b731766bc975b95ee7cc1f90fd2