Explore Workflows

https://github.com/ncbi/pgap.git

Path: task_types/tt_format_rrnas_from_seq_entry.cwl

Branch/Commit ID: 466a62729c20256c2f962d247ffaf2e782a0a023

https://github.com/DataBiosphere/toil.git

Path: src/toil/test/cwl/download_subdirectory.cwl

Branch/Commit ID: 4d938343078dfdb6ec47be9e08d4fc532c7816c5

https://github.com/common-workflow-language/cwl-v1.2.git

Path: tests/io-int-optional-wf.cwl

Branch/Commit ID: 1f3ef888d9ef2306c828065c460c1800604f0de4

abundace profiles from annotated files, for protein and/or rna

https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/abundance-clca.workflow.cwl

Branch/Commit ID: 721aaf285e1848c3c52da38a1fed95192aeff8f4

https://github.com/NCI-GDC/gdc-dnaseq-cwl.git

Path: gdc-dnaseq-aln-cwl/gdc_dnaseq.bamfastq_align.workflow.cwl

Branch/Commit ID: 65510af2ab705bfd3e9d4ca7281335de2adba2df

https://github.com/common-workflow-lab/wdl-cwl-translator.git

Path: wdl2cwl/tests/cwl_files/merge_svs.cwl

Branch/Commit ID: 2a1b9d0cbf1fd2b1c9f6faab2ef8254924642b82

Remove sequences which align against a reference set using bowtie2. The references are preformatted (index files)

https://github.com/MG-RAST/pipeline.git

Path: CWL/Workflows/organism-screening.workflow.cwl

Branch/Commit ID: a14af40f76ed6108d6205984e03dd0870b0141eb

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/js_output_workflow.cwl

Branch/Commit ID: 20f01e04328537714e57d136e242d3e7a9d44266

https://github.com/uc-cdis/genomel_pipelines.git

Path: genomel/cwl/workflows/harmonization/alignment_novoalign_multi_readgroup.cwl

Branch/Commit ID: 39ddc4b79dc93076787046f591225dc7ca3100ce

https://github.com/NCI-GDC/gdc-rnaseq-cwl.git

Path: rnaseq-star-align/subworkflows/rnaseq_processing/star_align_workflow.cwl

Branch/Commit ID: 05460f7dfca5a900d7635ccae0e1b28cf764a02f