Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	bgzip and index VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bgzip_and_index.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea
	bam_readcount workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea
	extract_gencoll_ids	https://github.com/ncbi/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: 0514ffe248dd11068a3f2268bc67b6ce5ab051d2
	scatter-wf2.cwl	https://github.com/common-workflow-language/cwltool.git Path: cwltool/schemas/v1.0/v1.0/scatter-wf2.cwl Branch/Commit ID: 9f3b9e7b74d5a904b12674dfd1300b56a48c3d33
	extract_gencoll_ids	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_extract_gencoll_ids.cwl Branch/Commit ID: a539d600357a48a558daf43fc41a89aae79f9e86
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416
	fastqtosam_pe.cwl	https://github.com/nci-gdc/gdc-dnaseq-cwl.git Path: workflows/fastqtosam/fastqtosam_pe.cwl Branch/Commit ID: d5757ab1f3aad3c542950e1dbe8f9d2eec74bede
	umi per-lane alignment subworkflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/umi_alignment.cwl Branch/Commit ID: ece70ac30cd87100a70f7dc64d08fa72724e9416
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 4aba7c6591c2f1ebd827a36d325a58738c429bea
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: adcae308fdccaa1190083616118dfadb4df65dca