Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_vcf_mouse.cwl Branch/Commit ID: 3034168d652bfa930ba09af20e473a4564a8010d
	Vcf concordance evaluation workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/vcf_eval_concordance.cwl Branch/Commit ID: 54846feabbf008c1946db2a86d87252e0edd95b0
	kmer_ref_compare_wnode	https://github.com/ncbi/pgap.git Path: task_types/tt_kmer_ref_compare_wnode.cwl Branch/Commit ID: 041a234a935c7af7d3db95353ef80c61c88fc010
	Bisulfite alignment and QC	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/bisulfite.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd
	umi molecular alignment workflow	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/molecular_alignment.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8
	etl_http.cwl	https://github.com/NCI-GDC/gdc-dnaseq-cwl.git Path: workflows/bamfastq_align/etl_http.cwl Branch/Commit ID: 1326fb7fedca91a274fb7596c9052a4d279eacf9
	Subworkflow to allow calling different SV callers which require bam files as inputs	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/single_sample_sv_callers.cwl Branch/Commit ID: 54846feabbf008c1946db2a86d87252e0edd95b0
	main-NA12878-platinum-chr20.cwl	https://github.com/BD2KGenomics/toil-workflows.git Path: NA12878-platinum-chr20-workflow/main-NA12878-platinum-chr20.cwl Branch/Commit ID: 42125c2912a176e61cb7ca53d9b1785f7a3826fa
	align_sort_sa	https://github.com/ncbi-gpipe/pgap.git Path: task_types/tt_align_sort_sa.cwl Branch/Commit ID: 8dcf1cc79ea26e9fec999e77ceae1aebfff2cff6
	phase VCF	https://github.com/tmooney/cancer-genomics-workflow.git Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 233f026ffce240071edda526391be0c03186fce8