Explore Workflows

View already parsed workflows here or click here to add your own

Graph	Name	Retrieved From	View
	mirna_profiling.cwl	https://github.com/NCI-GDC/gdc-mirnaseq-cwl.git Path: workflows/mirnaseq_automation/mirna_profiling.cwl Branch/Commit ID: 963f6d502da2c4f152c1654e94008ccf8f6d0db3
	Unaligned bam to sorted, markduped bam	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/align_sort_markdup.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd
	Run pindel on provided region	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_region.cwl Branch/Commit ID: 54846feabbf008c1946db2a86d87252e0edd95b0
	phase VCF	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/phase_vcf.cwl Branch/Commit ID: 74647cc0f1abac4ee22950cfa89c44cf2ca3cffd
	gather AML trio outputs	https://github.com/genome/analysis-workflows.git Path: definitions/pipelines/gathered_cle_aml_trio.cwl Branch/Commit ID: e56f1024306aeb427d8aae2fff715ed2e8b8f86f
	Per-region pindel	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/pindel_cat.cwl Branch/Commit ID: 97572e3a088d79f6a4166385f79e79ea77b11470
	Exome QC workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/qc_exome.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0
	Raw sequence data to BQSR	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/sequence_to_bqsr.cwl Branch/Commit ID: 8c4e7372247a7f4ed9ed478ef8ea1d239bc88af0
	bam_readcount workflow	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/bam_readcount.cwl Branch/Commit ID: 509938802c5e42bb8084c6a5a26ab6425c60e69a
	Apply filters to VCF file	https://github.com/genome/analysis-workflows.git Path: definitions/subworkflows/filter_vcf_mouse.cwl Branch/Commit ID: 3034168d652bfa930ba09af20e473a4564a8010d