Explore Workflows

View already parsed workflows here or click here to add your own

Graph Name Retrieved From View
workflow graph sequence (bam or fastqs) to trimmed fastqs and HISAT alignments

https://github.com/genome/analysis-workflows.git

Path: definitions/subworkflows/sequence_to_trimmed_fastq_and_hisat_alignments.cwl

Branch/Commit ID: d57c2af01a3cb6016e5a264f60641eafd2e5aa05
workflow graph record-output-wf_v1_2.cwl

https://github.com/common-workflow-language/cwl-utils.git

Path: testdata/record-output-wf_v1_2.cwl

Branch/Commit ID: e413f9b185f0060ffbdd876062133d65daecb7da
workflow graph workflow.cwl

https://github.com/NAL-i5K/Organism_Onboarding.git

Path: flow_dispatch/workflow.cwl

Branch/Commit ID: 6f0888f9e4b15172109dcb1db2ee63f154a79100
workflow graph kfdrc_star_diploid_wf.cwl

https://github.com/kids-first/kf-rnaseq-workflow.git

Path: workflow/kfdrc_star_diploid_wf.cwl

Branch/Commit ID: 23efbed9d7faa40e6d6e8d85441887a003fafda5
workflow graph umi molecular alignment fastq workflow

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/alignment_umi_molecular.cwl

Branch/Commit ID: c625e05eefb1754353c1bdfa46c01dc61e6233dd
workflow graph scatter-wf4.cwl#main

https://github.com/common-workflow-language/cwltool.git

Path: tests/wf/scatter-wf4.cwl

Branch/Commit ID: f6aeeae01ca1d821f2be1966f48f5257100f90e5

Packed ID: main
workflow graph Bacterial Annotation, pass 3, structural annotation, functional annotation: ab initio GeneMark, by WP, by HMM (second pass)

https://github.com/ncbi/pgap.git

Path: bacterial_annot/wf_bacterial_annot_pass3.cwl

Branch/Commit ID: 6a29751f2b16659c1592f1e94837c989e68f3b8b
workflow graph count-lines3-wf.cwl

https://github.com/common-workflow-language/cwl-v1.1.git

Path: tests/count-lines3-wf.cwl

Branch/Commit ID: 5e3fac092a720c5670ae3e787eabe1aaade71d83
workflow graph HBA_calibrator.cwl

https://git.astron.nl/eosc/prefactor3-cwl.git

Path: workflows/HBA_calibrator.cwl

Branch/Commit ID: b6fabaa851824677da26f8240e27e832b98f666d
workflow graph gathered exome alignment and somatic variant detection

https://github.com/genome/analysis-workflows.git

Path: definitions/pipelines/somatic_exome_gathered.cwl

Branch/Commit ID: 2e298960837739717ec2928a99c5d811183012e6