Explore Workflows
View already parsed workflows here or click here to add your own
| Graph | Name | Retrieved From | View |
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extract_readgroup_fastq_pe_http.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/extract_readgroup_fastq_pe_http.cwl Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb |
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bwa_se.cwl
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https://github.com/NCI-GDC/gdc-dnaseq-cwl.git
Path: workflows/bamfastq_align/bwa_se.cwl Branch/Commit ID: 3cd06184444bb85e9773a3e7dc548c6dd3bdaccb |
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Execute CRISPR
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https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_mobile_elem/wf_bacterial_mobile_elem.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143 |
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Find reads with predicted coding sequences above 60 AA in length
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: workflows/orf_prediction.cwl Branch/Commit ID: 43d2fb8a5430dc56b55e84e3986d0079cad8d185 |
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panel of normals workflow
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https://github.com/hamid58b/cancer-genomics-workflow.git
Path: panel_of_normals/workflow.cwl Branch/Commit ID: 8c5ae3dbabfe73e0a577b91b25ef5b0b32f388cb |
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Run tRNAScan
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https://github.com/ncbi-gpipe/pgap.git
Path: bacterial_trna/wf_trnascan.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143 |
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collate_unique_SSU_headers.cwl
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https://github.com/ProteinsWebTeam/ebi-metagenomics-cwl.git
Path: tools/collate_unique_SSU_headers.cwl Branch/Commit ID: 316831663e84623eb0e3a260af252fef441924d4 |
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index sim seq
create sorted / filtered similarity file with feature sequences, and index by md5 |
https://github.com/MG-RAST/pipeline.git
Path: CWL/Workflows/index_sim_seq.workflow.cwl Branch/Commit ID: 932da3abed7166bd5a962871386ba2c31d47b85c |
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gp_makeblastdb
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https://github.com/ncbi-gpipe/pgap.git
Path: progs/gp_makeblastdb.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143 |
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Create Genomic Collection for Bacterial Pipeline
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https://github.com/ncbi-gpipe/pgap.git
Path: genomic_source/wf_genomic_source.cwl Branch/Commit ID: 33414c888997d558bdcb558ca33c3a728a3e6143 |
